STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFT1Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family. (541 aa)    
Predicted Functional Partners:
TOR3A
Torsin family 3 member A.
      
 0.900
MRPS18A
Mitochondrial ribosomal protein S18A.
   
  
 0.853
SPAG4
Sperm associated antigen 4.
   
  
 0.813
ALG1
Glycos_transf_1 domain-containing protein.
   
 
 0.772
ALG2
ALG2 alpha-1,3/1,6-mannosyltransferase.
   
 
 0.742
ALG11
ALG11 alpha-1,2-mannosyltransferase.
   
 
 0.706
PSMB6
Proteasome subunit beta.
 
      0.691
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
      
 0.624
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
  
 0.621
ALG13
Uncharacterized protein.
      
 0.594
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.