STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD1CUB and Sushi multiple domains 1. (3535 aa)    
Predicted Functional Partners:
KY
Kyphoscoliosis peptidase.
    
 0.635
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 
 0.603
PHTF2
Putative homeodomain transcription factor 2.
    
 0.596
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.559
SHPRH
SNF2 histone linker PHD RING helicase.
    
 
 0.540
POLR3H
RNA polymerase III subunit H.
   
  
 0.539
MFHAS1
Malignant fibrous histiocytoma amplified sequence 1.
    
 
 0.528
ARID3B
AT-rich interaction domain 3B.
   
 
 0.521
RORB
RAR related orphan receptor B.
      
 0.515
PDE1A
Phosphodiesterase.
      
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.