STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAFD1TRAF-type zinc finger domain containing 1. (583 aa)    
Predicted Functional Partners:
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.572
SNX10
Sorting nexin 10.
    
 
 0.565
SSH1
Slingshot protein phosphatase 1.
   
 
 0.535
ATP6AP1
ATPase H+ transporting accessory protein 1.
   
  
 0.526
BICDL1
BICD family like cargo adaptor 1.
    
 
 0.514
PHF2
PHD finger protein 2.
   
 
 0.500
NSFL1C
NSFL1 cofactor.
    
 
 0.413
ANKRD22
Ankyrin repeat domain 22.
   
 
 0.411
SLC17A1
Solute carrier family 17 member 1.
      
 0.407
SON
Uncharacterized protein.
  
 
 0.403
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.