STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTULINLOTU deubiquitinase with linear linkage specificity like. (362 aa)    
Predicted Functional Partners:
TMEM63C
Transmembrane protein 63C.
      
 0.709
FRMPD4
FERM and PDZ domain containing 4.
      
 0.650
EVI2B
Ecotropic viral integration site 2B.
      
 0.570
NCEH1
Neutral cholesterol ester hydrolase 1.
      
 0.499
MARCHF11
Membrane associated ring-CH-type finger 11.
   
  
 0.494
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.449
RPS27A
Ubiquitin-like domain-containing protein.
    
   0.429
ENSCAFP00000050780
Ubiquitin-like domain-containing protein.
    
   0.429
SGK1
Non-specific serine/threonine protein kinase.
      
 0.426
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.