H1-7 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

H1-7

Uncharacterized protein. (289 aa)

Predicted Functional Partners:

MRPL58

0.678

ATP5F1E

0.660

NDUFAF2

0.614

NUP188

0.608

NUP35

0.608

MRPL27

0.606

MRPL50

0.590

F1Q3Z4_CANLF

0.586

MRPL51

0.572

MRPL47

0.565

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1E	H1-7	ENSCAFP00000056507	ENSCAFP00000013240	ATP synthase F1 subunit epsilon.	Uncharacterized protein.	0.660
ATP5F1E	NDUFAF2	ENSCAFP00000056507	ENSCAFP00000010631	ATP synthase F1 subunit epsilon.	NADH:ubiquinone oxidoreductase complex assembly factor 2.	0.857
ATP5F1E	NUP188	ENSCAFP00000056507	ENSCAFP00000029662	ATP synthase F1 subunit epsilon.	Nucleoporin 188.	0.692
ATP5F1E	NUP35	ENSCAFP00000056507	ENSCAFP00000039452	ATP synthase F1 subunit epsilon.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.773
F1Q3Z4_CANLF	H1-7	ENSCAFP00000025046	ENSCAFP00000013240	H15 domain-containing protein.	Uncharacterized protein.	0.586
H1-7	ATP5F1E	ENSCAFP00000013240	ENSCAFP00000056507	Uncharacterized protein.	ATP synthase F1 subunit epsilon.	0.660
H1-7	F1Q3Z4_CANLF	ENSCAFP00000013240	ENSCAFP00000025046	Uncharacterized protein.	H15 domain-containing protein.	0.586
H1-7	MRPL27	ENSCAFP00000013240	ENSCAFP00000025072	Uncharacterized protein.	Mitochondrial ribosomal protein L27.	0.606
H1-7	MRPL47	ENSCAFP00000013240	ENSCAFP00000016748	Uncharacterized protein.	Mitochondrial ribosomal protein L47.	0.565
H1-7	MRPL50	ENSCAFP00000013240	ENSCAFP00000041006	Uncharacterized protein.	Mitochondrial ribosomal protein L50.	0.590
H1-7	MRPL51	ENSCAFP00000013240	ENSCAFP00000042091	Uncharacterized protein.	Mitochondrial ribosomal protein L51.	0.572
H1-7	MRPL58	ENSCAFP00000013240	ENSCAFP00000007006	Uncharacterized protein.	Mitochondrial ribosomal protein L58.	0.678
H1-7	NDUFAF2	ENSCAFP00000013240	ENSCAFP00000010631	Uncharacterized protein.	NADH:ubiquinone oxidoreductase complex assembly factor 2.	0.614
H1-7	NUP188	ENSCAFP00000013240	ENSCAFP00000029662	Uncharacterized protein.	Nucleoporin 188.	0.608
H1-7	NUP35	ENSCAFP00000013240	ENSCAFP00000039452	Uncharacterized protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.608
MRPL27	H1-7	ENSCAFP00000025072	ENSCAFP00000013240	Mitochondrial ribosomal protein L27.	Uncharacterized protein.	0.606
MRPL27	MRPL47	ENSCAFP00000025072	ENSCAFP00000016748	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L47.	0.953
MRPL27	MRPL50	ENSCAFP00000025072	ENSCAFP00000041006	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L50.	0.932
MRPL27	MRPL51	ENSCAFP00000025072	ENSCAFP00000042091	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L51.	0.844
MRPL27	MRPL58	ENSCAFP00000025072	ENSCAFP00000007006	Mitochondrial ribosomal protein L27.	Mitochondrial ribosomal protein L58.	0.952