STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83DFamily with sequence similarity 83 member D. (583 aa)    
Predicted Functional Partners:
HMMR
Hyaluronan mediated motility receptor.
   
 
 0.967
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
 
 0.820
BACH1
BTB domain and CNC homolog 1.
    
   0.768
APBB3
Amyloid beta precursor protein binding family B member 3.
   
   0.719
RHEX
Regulator of hemoglobinization and erythroid cell expansion.
      
 0.695
NUGGC
Nuclear GTPase, germinal center associated.
   
  
 0.694
EFR3B
EFR3 homolog B.
      
 0.686
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.657
ENSCAFP00000050395
Dynein light chain.
    
 
 0.650
ENSCAFP00000052824
Dynein light chain.
    
 
 0.650
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.