STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL2A1Collagen type II alpha 1 chain. (1488 aa)    
Predicted Functional Partners:
ACAN
Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage.
   
 
 0.944
CD44
CD44 antigen.
    
 0.931
COL1A1
Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen).
  
 
0.925
COL11A2
Collagen type XI alpha 2 chain.
  
0.893
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.889
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.889
GP6
Glycoprotein VI platelet.
     
 0.882
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.881
COL11A1
Collagen type XI alpha 1 chain.
  
0.879
MMP13
Matrix metallopeptidase 13.
   
 0.872
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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