ADAMDEC1 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ADAMDEC1

ADAM like decysin 1. (476 aa)

Predicted Functional Partners:

HCST

0.678

ARHGAP36

0.592

ZNF511

0.583

CLEC4D

0.534

TMPO

0.533

SMPDL3A

0.490

LOC448801

0.483

DPEP1

0.483

CLEC4E

0.442

C5AR2

0.424

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAMDEC1	ARHGAP36	ENSCAFP00000013336	ENSCAFP00000027712	ADAM like decysin 1.	Rho GTPase activating protein 36.	0.592
ADAMDEC1	C5AR2	ENSCAFP00000013336	ENSCAFP00000006200	ADAM like decysin 1.	Complement component 5a receptor 2.	0.424
ADAMDEC1	CLEC4D	ENSCAFP00000013336	ENSCAFP00000046211	ADAM like decysin 1.	C-type lectin domain family 4 member D.	0.534
ADAMDEC1	CLEC4E	ENSCAFP00000013336	ENSCAFP00000020525	ADAM like decysin 1.	C-type lectin domain family 4 member E.	0.442
ADAMDEC1	DPEP1	ENSCAFP00000013336	ENSCAFP00000029357	ADAM like decysin 1.	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.	0.483
ADAMDEC1	HCST	ENSCAFP00000013336	ENSCAFP00000040416	ADAM like decysin 1.	Hematopoietic cell signal transducer.	0.678
ADAMDEC1	LOC448801	ENSCAFP00000013336	ENSCAFP00000028974	ADAM like decysin 1.	Mastin; Trypsin-like serine protease. Has a preference for extended substrates with basic residues at the P1 position; Arg is preferred over Lys. Active towards calcitonin gene-related peptide and gelatin. Not active towards substance P, vasoactive intestinal peptide, type I collagen or azocasein.	0.483
ADAMDEC1	SMPDL3A	ENSCAFP00000013336	ENSCAFP00000038422	ADAM like decysin 1.	Acid sphingomyelinase-like phosphodiesterase.	0.490
ADAMDEC1	TMPO	ENSCAFP00000013336	ENSCAFP00000046908	ADAM like decysin 1.	Thymopoietin.	0.533
ADAMDEC1	ZNF511	ENSCAFP00000013336	ENSCAFP00000034604	ADAM like decysin 1.	Zinc finger protein 511.	0.583
ARHGAP36	ADAMDEC1	ENSCAFP00000027712	ENSCAFP00000013336	Rho GTPase activating protein 36.	ADAM like decysin 1.	0.592
ARHGAP36	SMPDL3A	ENSCAFP00000027712	ENSCAFP00000038422	Rho GTPase activating protein 36.	Acid sphingomyelinase-like phosphodiesterase.	0.591
C5AR2	ADAMDEC1	ENSCAFP00000006200	ENSCAFP00000013336	Complement component 5a receptor 2.	ADAM like decysin 1.	0.424
C5AR2	CLEC4D	ENSCAFP00000006200	ENSCAFP00000046211	Complement component 5a receptor 2.	C-type lectin domain family 4 member D.	0.408
C5AR2	TMPO	ENSCAFP00000006200	ENSCAFP00000046908	Complement component 5a receptor 2.	Thymopoietin.	0.429
CLEC4D	ADAMDEC1	ENSCAFP00000046211	ENSCAFP00000013336	C-type lectin domain family 4 member D.	ADAM like decysin 1.	0.534
CLEC4D	C5AR2	ENSCAFP00000046211	ENSCAFP00000006200	C-type lectin domain family 4 member D.	Complement component 5a receptor 2.	0.408
CLEC4D	CLEC4E	ENSCAFP00000046211	ENSCAFP00000020525	C-type lectin domain family 4 member D.	C-type lectin domain family 4 member E.	0.966
CLEC4D	TMPO	ENSCAFP00000046211	ENSCAFP00000046908	C-type lectin domain family 4 member D.	Thymopoietin.	0.466
CLEC4E	ADAMDEC1	ENSCAFP00000020525	ENSCAFP00000013336	C-type lectin domain family 4 member E.	ADAM like decysin 1.	0.442