STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX3-1NK3 homeobox 1. (214 aa)    
Predicted Functional Partners:
FOXF2
Forkhead box F2.
   
 
 0.547
PATZ1
POZ/BTB and AT hook containing zinc finger 1.
      
 0.514
ACP3
Acid phosphatase, prostate; Belongs to the histidine acid phosphatase family.
      
 0.464
TFAP4
Transcription factor AP-4.
   
  
 0.429
CREB3L4
cAMP responsive element binding protein 3 like 4.
      
 0.424
PIK3CD
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta; Belongs to the PI3/PI4-kinase family.
      
 0.422
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.422
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
      
 0.422
MAZ
MYC associated zinc finger protein.
      
 0.421
LOC610048
Bms1-type G domain-containing protein.
      
 0.419
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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