STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100856585Uncharacterized protein. (2292 aa)    
Predicted Functional Partners:
RBM39
RNA binding motif protein 39.
   
 
 0.851
PRRC2C
Proline rich coiled-coil 2C.
   
    0.822
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.707
PRPF4B
Pre-mRNA processing factor 4B.
   
   0.682
RBM25
RNA binding motif protein 25.
   
 
 0.672
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.666
FAM83H
Family with sequence similarity 83 member H.
    
 
 0.637
RANBP2
RAN binding protein 2.
   
 
 0.599
DDX5
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.578
ENSCAFP00000053603
Uncharacterized protein.
   
 
 0.578
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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