STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX5LIM homeobox 5. (402 aa)    
Predicted Functional Partners:
CCNK
Cyclin K; Belongs to the cyclin family.
    
   0.813
DBX2
Developing brain homeobox 2.
    
 
 0.792
TLX1
T cell leukemia homeobox 1.
    
 
 0.751
ZIC4
Zic family member 4.
   
 
 0.733
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.689
NEUROD2
Neurogenic differentiation factor.
   
  
 0.665
BARHL1
BarH like homeobox 1.
   
 
 0.649
DBX1
Developing brain homeobox 1.
   
 
 0.645
ZIC2
Zic family member 2.
   
 
 0.533
RELN
Reelin.
      
 0.518
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.