STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF408Zinc finger protein 408. (752 aa)    
Predicted Functional Partners:
GPATCH3
G-patch domain containing 3.
   
    0.876
SAMD11
Sterile alpha motif domain containing 11.
   
 
 0.849
GRAMD4
GRAM domain containing 4.
   
 
 0.794
CCNJ
Cyclin J; Belongs to the cyclin family.
   
 
 0.785
TSPAN12
Tetraspanin.
      
 0.777
BTBD9
BTB domain containing 9.
   
  
 0.750
ACOT13
Acyl-CoA thioesterase 13.
      
 0.747
AKAP7
A-kinase anchoring protein 7.
      
 0.702
NDP
Norrin cystine knot growth factor NDP.
   
 
 0.684
NKRF
NFKB repressing factor.
      
 0.673
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.