STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD2RNA pseudouridine synthase domain containing 2. (552 aa)    
Predicted Functional Partners:
PNO1
Partner of NOB1 homolog.
   
  
 0.768
ASB3
Uncharacterized protein.
   
 
 0.767
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.755
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.746
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.744
PUS7
Pseudouridine synthase 7.
   
 
 0.736
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.728
GTPBP3
GTP binding protein 3, mitochondrial.
  
 
 0.719
ARRDC3
Arrestin domain containing 3.
      
 0.678
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.677
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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