STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (279 aa)    
Predicted Functional Partners:
UTP23
UTP23 small subunit processome component.
   
  
 0.816
WDR36
WD repeat domain 36.
   
   0.729
NOL6
Nucleolar protein 6.
   
 
 0.723
NOP53
NOP53 ribosome biogenesis factor.
   
    0.704
LTV1
LTV1 ribosome biogenesis factor.
   
  
 0.697
RBM28
RNA binding motif protein 28.
   
  
 0.693
UTP4
UTP4 small subunit processome component.
   
   0.693
HEATR1
HEAT repeat containing 1.
   
   0.657
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.647
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
    0.638
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.