STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIOTrio Rho guanine nucleotide exchange factor. (3053 aa)    
Predicted Functional Partners:
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
   
 
 0.783
NUDCD1
NudC domain containing 1.
    
 
 0.663
NOX3
Predicted NADPH oxidase-3.
   
 0.648
TMEM181
Transmembrane protein 181.
   
 
 0.632
RHOBTB1
Rho related BTB domain containing 1.
    
 0.616
RHOBTB2
Rho related BTB domain containing 2.
    
 0.616
ARID1B
AT-rich interaction domain 1B.
   
  
 0.613
RAC2
Rac family small GTPase 2.
    
 0.561
RAC3
Uncharacterized protein.
    
 0.561
RAC1
Ras-related C3 botulinum toxin substrate 1; Plasma membrane-associated small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate cellular responses such as secretory processes, phagocytosis of apoptotic cells, epithelial cell polarization, neurons adhesion, migration and differentiation, and growth-factor induced formation of membrane ruffles. Rac1 p21/rho GDI heterodimer is the active component of the cytosolic factor sigma 1, which is involved in stimulation of the NADPH oxidase activity [...]
    
 0.561
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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