C26H12orf49 protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C26H12orf49

Uncharacterized protein. (205 aa)

Predicted Functional Partners:

MBTPS1

0.806

SYCP3

0.427

TMEM41A

0.409

MPC2

0.404

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C26H12orf49	MBTPS1	ENSCAFP00000013653	ENSCAFP00000029588	Uncharacterized protein.	Membrane bound transcription factor peptidase, site 1.	0.806
C26H12orf49	MPC2	ENSCAFP00000013653	ENSCAFP00000022620	Uncharacterized protein.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.404
C26H12orf49	SYCP3	ENSCAFP00000013653	ENSCAFP00000038284	Uncharacterized protein.	N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.	0.427
C26H12orf49	TMEM41A	ENSCAFP00000013653	ENSCAFP00000019492	Uncharacterized protein.	Transmembrane protein 41A.	0.409
MBTPS1	C26H12orf49	ENSCAFP00000029588	ENSCAFP00000013653	Membrane bound transcription factor peptidase, site 1.	Uncharacterized protein.	0.806
MBTPS1	TMEM41A	ENSCAFP00000029588	ENSCAFP00000019492	Membrane bound transcription factor peptidase, site 1.	Transmembrane protein 41A.	0.517
MPC2	C26H12orf49	ENSCAFP00000022620	ENSCAFP00000013653	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Uncharacterized protein.	0.404
MPC2	TMEM41A	ENSCAFP00000022620	ENSCAFP00000019492	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Transmembrane protein 41A.	0.527
SYCP3	C26H12orf49	ENSCAFP00000038284	ENSCAFP00000013653	N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.	Uncharacterized protein.	0.427
TMEM41A	C26H12orf49	ENSCAFP00000019492	ENSCAFP00000013653	Transmembrane protein 41A.	Uncharacterized protein.	0.409
TMEM41A	MBTPS1	ENSCAFP00000019492	ENSCAFP00000029588	Transmembrane protein 41A.	Membrane bound transcription factor peptidase, site 1.	0.517
TMEM41A	MPC2	ENSCAFP00000019492	ENSCAFP00000022620	Transmembrane protein 41A.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.527