STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOMM70Translocase of outer mitochondrial membrane 70. (609 aa)    
Predicted Functional Partners:
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 0.997
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 0.995
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.995
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
    
 0.993
PINK1
PTEN induced kinase 1.
    
 0.976
RHOT1
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.975
TOMM20L
Translocase of outer mitochondrial membrane 20 like.
   
 0.971
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.968
TOMM22
Uncharacterized protein.
   
 0.956
MARCHF5
Membrane associated ring-CH-type finger 5.
    
 0.953
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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