STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100856647PKS_ER domain-containing protein. (349 aa)    
Predicted Functional Partners:
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
      
 0.811
C27H12orf4
Chromosome 27 C12orf4 homolog.
   
   0.774
SLITRK4
SLIT and NTRK like family member 4.
    
 0.715
SPTSSB
Serine palmitoyltransferase small subunit B.
   
  
 0.695
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.689
ICA1
Islet cell autoantigen 1.
      
 0.687
GPR171
G protein-coupled receptor 171; Belongs to the G-protein coupled receptor 1 family.
      
 0.687
ANTXR2
Anthrax toxin receptor; Belongs to the ATR family.
    
 0.642
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.626
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
  
   
 0.611
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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