STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTSF1LGametocyte specific factor 1 like. (157 aa)    
Predicted Functional Partners:
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
      
 0.636
ARMC1
Armadillo repeat-containing protein 1.
      
 0.562
SEPTIN11
Septin 11; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.522
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
      
 0.521
FAM151B
Family with sequence similarity 151 member B.
      
 0.515
PUS10
Pseudouridine synthase 10.
      
 0.481
TNPO1
Transportin 1.
      
 0.480
BTG4
BTG anti-proliferation factor 4.
      
 0.480
CSDE1
Cold shock domain containing E1.
    
 
 0.480
GNG8
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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