STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DBX2Developing brain homeobox 2. (226 aa)    
Predicted Functional Partners:
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.854
LHX5
LIM homeobox 5.
    
 
 0.820
LHX1
LIM homeobox 1.
   
 
 0.615
OLIG1
Oligodendrocyte transcription factor 1.
   
  
 0.607
IRX3
Iroquois homeobox 3.
    
 
 0.554
PAX2
Paired box 2.
      
 0.427
MIDN
Midnolin.
      
 0.417
RNF220
Ring finger protein 220.
    
 0.408
FOXA2
Forkhead box A2.
      
 0.402
ZC4H2
Zinc finger C4H2-type containing.
      
 0.401
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.