STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT13Synaptotagmin 13. (426 aa)    
Predicted Functional Partners:
RAB3C
RAB3C, member RAS oncogene family.
   
 
 0.653
PDZD11
PDZ domain containing 11.
      
 0.635
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.627
UNC13A
Unc-13 homolog A.
   
  
 0.607
EXOC8
Exocyst complex component 8.
      
 0.602
VAMP1
Vesicle associated membrane protein 1.
   
 
 0.590
EXOC5
Exocyst complex component 5.
      
 0.564
SYT16
Synaptotagmin 16.
   
  
0.563
STXBP5
Syntaxin binding protein 5.
      
 0.558
KCNK16
Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.525
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.