STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NISCHNischarin. (1537 aa)    
Predicted Functional Partners:
SH3BGRL2
SH3 domain binding glutamate rich protein like 2.
      
 0.646
MXD4
MAX dimerization protein 4.
   
  
 0.633
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.625
NGRN
Neugrin, neurite outgrowth associated.
      
 0.605
CALY
Calcyon neuron specific vesicular protein.
   
  
 0.598
SHARPIN
SHANK associated RH domain interactor.
   
 
 0.583
RUNDC3A
RUN domain containing 3A.
      
 0.575
FILIP1
Filamin A interacting protein 1.
   
  
 0.569
CIRBP
Cold inducible RNA binding protein.
   
  
 0.567
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
  
 0.563
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.