STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN18Tetraspanin. (248 aa)    
Predicted Functional Partners:
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.830
TP53I11
Tumor protein p53 inducible protein 11.
      
 0.828
PHF21A
PHD finger protein 21A.
      
 0.704
PRDM11
PR/SET domain 11.
      
 0.699
ARHGAP28
Rho GTPase activating protein 28.
      
 0.673
P2RY1
Purinergic receptor P2Y1 variant 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.612
ACCS
1-aminocyclopropane-1-carboxylate synthase homolog (inactive).
      
 0.610
NOVA2
NOVA alternative splicing regulator 2.
      
 0.598
SYT13
Synaptotagmin 13.
      
 0.598
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.593
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.