STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTPALAlpha tocopherol transfer protein like. (342 aa)    
Predicted Functional Partners:
PKIG
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.695
FAM171B
Family with sequence similarity 171 member B.
   
  
 0.607
ZSWIM2
Zinc finger SWIM-type containing 2.
      
 0.606
SERINC3
Serine incorporator 3.
   
  
 0.599
CYP51A1
Cytochrome P450 family 51 subfamily A member 1; Belongs to the cytochrome P450 family.
   
 
 0.481
ZNF398
Zinc finger protein 398.
    
 
 0.475
INO80
INO80 complex ATPase subunit.
    
   0.474
MRGBP
MRG domain binding protein.
    
   0.472
F1PFM4_CANLF
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
      
 0.442
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase.
   
 
 0.423
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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