STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPPhytanoyl-CoA 2-hydroxylase interacting protein. (367 aa)    
Predicted Functional Partners:
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.622
LIMS2
LIM zinc finger domain containing 2.
   
  
 0.605
TCF23
Transcription factor 23.
   
  
 0.604
RTN4RL2
Reticulon 4 receptor like 2.
      
 0.598
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.595
SLC26A10
Solute carrier family 26 member 10.
      
 0.593
PLCL1
Phosphoinositide phospholipase C.
      
 0.591
CIART
Circadian associated repressor of transcription.
      
 0.591
FAM78A
Family with sequence similarity 78 member A.
   
  
 0.586
RASL11A
RAS like family 11 member A.
      
 0.585
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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