STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
 0.997
PLRG1
Pleiotropic regulator 1.
   
 0.997
PRPF19
Pre-mRNA processing factor 19.
   
 0.995
CDC40
Cell division cycle 40.
   
 
 0.973
CWC15
CWC15 spliceosome associated protein homolog.
   
 0.972
PRPF8
Pre-mRNA processing factor 8.
   
 
 0.968
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.961
XAB2
XPA binding protein 2.
    
 
 0.957
SF3B4
Splicing factor 3b subunit 4.
   
   0.953
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 
 0.952
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.