STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB11Zinc finger and BTB domain containing 11. (1054 aa)    
Predicted Functional Partners:
RPF1
Ribosome production factor 1 homolog.
   
   0.731
ENSCAFP00000060085
Uncharacterized protein.
   
   0.731
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
   0.623
RPL3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.488
J9P6X5_CANLF
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.488
ANKRD27
Ankyrin repeat domain 27.
    
 
 0.483
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 
 0.479
DENR
Density-regulated protein; Belongs to the DENR family.
      
 0.472
UBTF
Upstream binding transcription factor.
    
 
 0.428
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.427
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.