CD302 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CD302

Uncharacterized protein. (1723 aa)

Predicted Functional Partners:

J9P1G7_CANLF

0.913

ITGB6

0.707

EIF4E1B

0.608

CEP104

0.597

IDNK

0.593

MTRF1L

0.522

CLEC1B

0.520

HIVEP2

0.511

GANAB

0.509

BTNL9

0.493

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTNL9	CD302	ENSCAFP00000019022	ENSCAFP00000014120	Butyrophilin like 9.	Uncharacterized protein.	0.493
CD302	BTNL9	ENSCAFP00000014120	ENSCAFP00000019022	Uncharacterized protein.	Butyrophilin like 9.	0.493
CD302	CEP104	ENSCAFP00000014120	ENSCAFP00000055335	Uncharacterized protein.	Centrosomal protein 104.	0.597
CD302	CLEC1B	ENSCAFP00000014120	ENSCAFP00000019932	Uncharacterized protein.	C-type lectin domain family 1 member B.	0.520
CD302	EIF4E1B	ENSCAFP00000014120	ENSCAFP00000024482	Uncharacterized protein.	Eukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family.	0.608
CD302	GANAB	ENSCAFP00000014120	ENSCAFP00000057397	Uncharacterized protein.	Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family.	0.509
CD302	HIVEP2	ENSCAFP00000014120	ENSCAFP00000000417	Uncharacterized protein.	Human immunodeficiency virus type I enhancer binding protein 2.	0.511
CD302	IDNK	ENSCAFP00000014120	ENSCAFP00000061018	Uncharacterized protein.	IDNK gluconokinase.	0.593
CD302	ITGB6	ENSCAFP00000014120	ENSCAFP00000014567	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.707
CD302	J9P1G7_CANLF	ENSCAFP00000014120	ENSCAFP00000039391	Uncharacterized protein.	C-type lectin domain-containing protein.	0.913
CD302	MTRF1L	ENSCAFP00000014120	ENSCAFP00000000769	Uncharacterized protein.	Mitochondrial translational release factor 1 like.	0.522
CEP104	CD302	ENSCAFP00000055335	ENSCAFP00000014120	Centrosomal protein 104.	Uncharacterized protein.	0.597
CEP104	EIF4E1B	ENSCAFP00000055335	ENSCAFP00000024482	Centrosomal protein 104.	Eukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family.	0.515
CEP104	IDNK	ENSCAFP00000055335	ENSCAFP00000061018	Centrosomal protein 104.	IDNK gluconokinase.	0.493
CLEC1B	CD302	ENSCAFP00000019932	ENSCAFP00000014120	C-type lectin domain family 1 member B.	Uncharacterized protein.	0.520
EIF4E1B	CD302	ENSCAFP00000024482	ENSCAFP00000014120	Eukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.608
EIF4E1B	CEP104	ENSCAFP00000024482	ENSCAFP00000055335	Eukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family.	Centrosomal protein 104.	0.515
EIF4E1B	IDNK	ENSCAFP00000024482	ENSCAFP00000061018	Eukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family.	IDNK gluconokinase.	0.819
GANAB	CD302	ENSCAFP00000057397	ENSCAFP00000014120	Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.509
HIVEP2	CD302	ENSCAFP00000000417	ENSCAFP00000014120	Human immunodeficiency virus type I enhancer binding protein 2.	Uncharacterized protein.	0.511