STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM3Zinc finger SWIM-type containing 3. (696 aa)    
Predicted Functional Partners:
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 
 0.703
ARID4A
AT-rich interaction domain 4A.
   
 
 0.684
NIPSNAP1
Nipsnap homolog 1.
      
 0.678
CATSPERE
Catsper channel auxiliary subunit epsilon.
      
 0.678
ARID4B
AT-rich interaction domain 4B.
   
 
 0.634
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.615
MEAF6
MYST/Esa1 associated factor 6.
   
 
 0.590
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 
 0.584
SUMF1
Sulfatase modifying factor 1.
   
 
 0.570
CRACR2A
Calcium release activated channel regulator 2A.
      
 0.566
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.