STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM1Zinc finger SWIM-type containing 1. (456 aa)    
Predicted Functional Partners:
ZSWIM9
Zinc finger SWIM-type containing 9.
      
 0.762
ZSWIM7
Zinc finger SWIM-type containing 7.
      
 0.594
ARID4B
AT-rich interaction domain 4B.
    
 
 0.593
ARID4A
AT-rich interaction domain 4A.
    
 
 0.593
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.548
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 
 0.522
MRGBP
MRG domain binding protein.
    
 
 0.498
MEAF6
MYST/Esa1 associated factor 6.
   
 
 0.490
SEC14L4
SEC14 like lipid binding 4.
      
 0.475
CCDC102B
Coiled-coil domain containing 102B.
      
 0.472
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.