STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAB21L3Mab-21 like 3. (402 aa)    
Predicted Functional Partners:
GASK1A
Golgi associated kinase 1A.
   
    0.967
AGGF1
Angiogenic factor with G-patch and FHA domains 1.
    
   0.812
GMNC
Geminin coiled-coil domain containing.
      
 0.762
LARP6
La ribonucleoprotein domain family member 6.
   
  
 0.695
ARHGEF19
Rho guanine nucleotide exchange factor 19.
   
  
 0.665
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
      
 0.580
R3HDM2
Uncharacterized protein.
   
   0.541
RFX4
Regulatory factor X4.
      
 0.468
MB21D2
Mab-21 domain containing 2.
      
 0.468
UPK1A
Uroplakin 1A; Belongs to the tetraspanin (TM4SF) family.
  
     0.441
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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