MAB21L3 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAB21L3

Mab-21 like 3. (402 aa)

Predicted Functional Partners:

GMNC

0.937

LARP6

0.775

MCIDAS

0.708

RFX4

0.646

PYGO1

0.572

TTC25

0.528

DERA

0.501

ST6GAL2

0.497

NTNG2

0.491

KCNB1

0.488

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DERA	GMNC	ENSCAFP00000048203	ENSCAFP00000039030	Serine/threonine kinase receptor associated protein.	Geminin coiled-coil domain containing.	0.517
DERA	LARP6	ENSCAFP00000048203	ENSCAFP00000025971	Serine/threonine kinase receptor associated protein.	La ribonucleoprotein domain family member 6.	0.741
DERA	MAB21L3	ENSCAFP00000048203	ENSCAFP00000014374	Serine/threonine kinase receptor associated protein.	Mab-21 like 3.	0.501
GMNC	DERA	ENSCAFP00000039030	ENSCAFP00000048203	Geminin coiled-coil domain containing.	Serine/threonine kinase receptor associated protein.	0.517
GMNC	LARP6	ENSCAFP00000039030	ENSCAFP00000025971	Geminin coiled-coil domain containing.	La ribonucleoprotein domain family member 6.	0.784
GMNC	MAB21L3	ENSCAFP00000039030	ENSCAFP00000014374	Geminin coiled-coil domain containing.	Mab-21 like 3.	0.937
GMNC	MCIDAS	ENSCAFP00000039030	ENSCAFP00000030764	Geminin coiled-coil domain containing.	Multiciliate differentiation and DNA synthesis associated cell cycle protein.	0.567
GMNC	RFX4	ENSCAFP00000039030	ENSCAFP00000002647	Geminin coiled-coil domain containing.	Regulatory factor X4.	0.664
GMNC	TTC25	ENSCAFP00000039030	ENSCAFP00000023192	Geminin coiled-coil domain containing.	Tetratricopeptide repeat domain 25.	0.557
KCNB1	MAB21L3	ENSCAFP00000016730	ENSCAFP00000014374	Potassium voltage-gated channel subfamily B member 1; Belongs to the potassium channel family.	Mab-21 like 3.	0.488
LARP6	DERA	ENSCAFP00000025971	ENSCAFP00000048203	La ribonucleoprotein domain family member 6.	Serine/threonine kinase receptor associated protein.	0.741
LARP6	GMNC	ENSCAFP00000025971	ENSCAFP00000039030	La ribonucleoprotein domain family member 6.	Geminin coiled-coil domain containing.	0.784
LARP6	MAB21L3	ENSCAFP00000025971	ENSCAFP00000014374	La ribonucleoprotein domain family member 6.	Mab-21 like 3.	0.775
LARP6	MCIDAS	ENSCAFP00000025971	ENSCAFP00000030764	La ribonucleoprotein domain family member 6.	Multiciliate differentiation and DNA synthesis associated cell cycle protein.	0.523
LARP6	RFX4	ENSCAFP00000025971	ENSCAFP00000002647	La ribonucleoprotein domain family member 6.	Regulatory factor X4.	0.465
LARP6	TTC25	ENSCAFP00000025971	ENSCAFP00000023192	La ribonucleoprotein domain family member 6.	Tetratricopeptide repeat domain 25.	0.665
MAB21L3	DERA	ENSCAFP00000014374	ENSCAFP00000048203	Mab-21 like 3.	Serine/threonine kinase receptor associated protein.	0.501
MAB21L3	GMNC	ENSCAFP00000014374	ENSCAFP00000039030	Mab-21 like 3.	Geminin coiled-coil domain containing.	0.937
MAB21L3	KCNB1	ENSCAFP00000014374	ENSCAFP00000016730	Mab-21 like 3.	Potassium voltage-gated channel subfamily B member 1; Belongs to the potassium channel family.	0.488
MAB21L3	LARP6	ENSCAFP00000014374	ENSCAFP00000025971	Mab-21 like 3.	La ribonucleoprotein domain family member 6.	0.775