STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC54Coiled-coil domain containing 54. (328 aa)    
Predicted Functional Partners:
ADAM29
Pep_M12B_propep domain-containing protein.
   
  
 0.714
ADAM2
ADAM metallopeptidase domain 2.
   
  
 0.692
SULT1C3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.643
EFNA4
ADAM metallopeptidase domain 15; Belongs to the ephrin family.
      
 0.582
SOX30
SRY-box 30.
   
  
 0.565
RTP3
Receptor transporter protein 3.
   
  
 0.563
TMC2
Transmembrane channel-like protein.
   
  
 0.561
TMCO2
Transmembrane and coiled-coil domains 2.
   
  
 0.547
FAM81B
Family with sequence similarity 81 member B.
   
  
 0.543
TNP1
Transition protein 1.
   
  
 0.543
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.