STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (580 aa)    
Predicted Functional Partners:
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.598
RPL35
Ribosomal protein L35.
   
 
 0.531
ENSCAFP00000043720
Uncharacterized protein.
    
 
 0.530
USP32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
    
 
 0.530
TMEM150A
Transmembrane protein 150A.
   
  
 0.524
BGLAP
Osteocalcin; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.523
TRIM35
Tripartite motif containing 35.
      
 0.517
POMT2
Protein O-mannosyltransferase 2.
   
  
 0.517
TRIM65
Tripartite motif containing 65.
      
 0.515
EXOSC2
Exosome component 2.
      
 0.515
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.