STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1BPOC1 centriolar protein B. (473 aa)    
Predicted Functional Partners:
POC5
POC5 centriolar protein.
    
 
 0.859
CEP135
Centrosomal protein 135.
    
 
 0.786
FGD6
FYVE, RhoGEF and PH domain containing 6.
    
 
 0.786
C29H8orf37
Chromosome 29 C8orf37 homolog.
      
 0.702
CETN1
Centrin 1.
    
 
 0.691
UTP3
UTP3, small subunit processome component.
   
  
 0.686
ESX1
ESX homeobox 1.
      
 0.671
CEP78
Centrosomal protein 78.
   
 
 0.659
MYH15
Myosin heavy chain 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.658
PANK2
Pantothenate kinase 2.
      
 0.656
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.