TENT5C protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TENT5C

Terminal nucleotidyltransferase 5C. (436 aa)

Predicted Functional Partners:

BCCIP

0.711

MST1R

0.666

PLK4

0.585

SPATC1L

0.581

CFAP52

0.528

CNTLN

0.523

PMFBP1

0.519

FNDC3A

0.482

PPM1H

0.465

SEH1L

0.458

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCCIP	TENT5C	ENSCAFP00000018957	ENSCAFP00000014524	BRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family.	Terminal nucleotidyltransferase 5C.	0.711
CFAP52	PMFBP1	ENSCAFP00000025696	ENSCAFP00000047603	Cilia and flagella associated protein 52.	Polyamine modulated factor 1 binding protein 1.	0.604
CFAP52	SPATC1L	ENSCAFP00000025696	ENSCAFP00000017564	Cilia and flagella associated protein 52.	Spermatogenesis and centriole associated 1 like.	0.692
CFAP52	TENT5C	ENSCAFP00000025696	ENSCAFP00000014524	Cilia and flagella associated protein 52.	Terminal nucleotidyltransferase 5C.	0.528
CNTLN	PLK4	ENSCAFP00000035630	ENSCAFP00000005783	Centlein.	Polo like kinase 4.	0.553
CNTLN	PMFBP1	ENSCAFP00000035630	ENSCAFP00000047603	Centlein.	Polyamine modulated factor 1 binding protein 1.	0.716
CNTLN	SPATC1L	ENSCAFP00000035630	ENSCAFP00000017564	Centlein.	Spermatogenesis and centriole associated 1 like.	0.667
CNTLN	TENT5C	ENSCAFP00000035630	ENSCAFP00000014524	Centlein.	Terminal nucleotidyltransferase 5C.	0.523
FNDC3A	TENT5C	ENSCAFP00000040020	ENSCAFP00000014524	Fibronectin type III domain containing 3A.	Terminal nucleotidyltransferase 5C.	0.482
MST1R	TENT5C	ENSCAFP00000031338	ENSCAFP00000014524	Macrophage stimulating 1 receptor.	Terminal nucleotidyltransferase 5C.	0.666
PLK4	CNTLN	ENSCAFP00000005783	ENSCAFP00000035630	Polo like kinase 4.	Centlein.	0.553
PLK4	SEH1L	ENSCAFP00000005783	ENSCAFP00000027838	Polo like kinase 4.	Centrosomal protein 192.	0.965
PLK4	TENT5C	ENSCAFP00000005783	ENSCAFP00000014524	Polo like kinase 4.	Terminal nucleotidyltransferase 5C.	0.585
PMFBP1	CFAP52	ENSCAFP00000047603	ENSCAFP00000025696	Polyamine modulated factor 1 binding protein 1.	Cilia and flagella associated protein 52.	0.604
PMFBP1	CNTLN	ENSCAFP00000047603	ENSCAFP00000035630	Polyamine modulated factor 1 binding protein 1.	Centlein.	0.716
PMFBP1	SPATC1L	ENSCAFP00000047603	ENSCAFP00000017564	Polyamine modulated factor 1 binding protein 1.	Spermatogenesis and centriole associated 1 like.	0.688
PMFBP1	TENT5C	ENSCAFP00000047603	ENSCAFP00000014524	Polyamine modulated factor 1 binding protein 1.	Terminal nucleotidyltransferase 5C.	0.519
PPM1H	TENT5C	ENSCAFP00000000473	ENSCAFP00000014524	Protein phosphatase, Mg2+/Mn2+ dependent 1H.	Terminal nucleotidyltransferase 5C.	0.465
SEH1L	PLK4	ENSCAFP00000027838	ENSCAFP00000005783	Centrosomal protein 192.	Polo like kinase 4.	0.965
SEH1L	TENT5C	ENSCAFP00000027838	ENSCAFP00000014524	Centrosomal protein 192.	Terminal nucleotidyltransferase 5C.	0.458