STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMS1RNA binding motif single stranded interacting protein 1. (431 aa)    
Predicted Functional Partners:
RBMS3
RNA binding motif single stranded interacting protein 3.
   
    0.804
RRBP1
Ribosome-binding protein 1; Acts as a ribosome receptor and mediates interaction between the ribosome and the endoplasmic reticulum membrane.
   
 
 0.755
AGO3
Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.
   
 
 0.646
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
      
 0.630
DOK6
Docking protein 6.
      
 0.609
MRRF
Mitochondrial ribosome recycling factor.
    
   0.606
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.597
RNF144A
RBR-type E3 ubiquitin transferase.
      
 0.591
STX7
Syntaxin 7; Belongs to the syntaxin family.
    
   0.583
RIDA
Reactive intermediate imine deaminase A homolog.
    
   0.581
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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