STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMS1RNA binding motif single stranded interacting protein 1. (431 aa)    
Predicted Functional Partners:
PDS5A
Uncharacterized protein.
   
  
 0.562
AGO3
Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.
   
 
 0.550
CCPG1
Cell cycle progression 1.
   
 
 0.546
SNTB1
Syntrophin beta 1.
      
 0.519
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
      
 0.518
CDK5RAP1
CDK5 regulatory subunit associated protein 1.
   
  
 0.506
PRRC2B
Proline rich coiled-coil 2B.
    
 
 0.504
OSTF1
Osteoclast stimulating factor 1.
   
  
 0.502
SEC14L5
SEC14 like lipid binding 5.
      
 0.494
GCFC2
GC-rich sequence DNA-binding factor 2.
      
 0.493
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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