STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX19Sorting nexin 19. (999 aa)    
Predicted Functional Partners:
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
   
  
 0.712
STARD3NL
STARD3 N-terminal like.
   
  
 0.682
PPT2
Palmitoyl-protein thioesterase 2.
   
  
 0.680
ZDHHC21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
  
 0.678
TXLNG
Taxilin gamma.
      
 0.658
NDRG3
NDRG family member 3.
      
 0.657
CREG1
Cellular repressor of E1A stimulated genes 1; Belongs to the CREG family.
      
 0.641
CHMP1A
Charged multivesicular body protein 1A.
   
  
 0.612
VPS13C
Vacuolar protein sorting 13 homolog C.
    
 
 0.586
ZFYVE27
Zinc finger FYVE-type containing 27.
   
  
 0.525
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.