STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (2326 aa)    
Predicted Functional Partners:
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.921
PHIP
Pleckstrin homology domain interacting protein.
   
   0.754
LOC488263
Histone H3; Belongs to the histone H3 family.
    
 0.727
ATRX
ATRX chromatin remodeler.
   
 
 0.693
DDB1
Damage specific DNA binding protein 1.
    
 
 0.665
BIRC6
Baculoviral IAP repeat containing 6.
   
 
 0.661
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
   0.633
UBXN7
UBX domain-containing protein 7.
   
 
 0.630
PLCH1
Phosphoinositide phospholipase C.
      
 0.627
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
    0.623
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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