STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (2326 aa)    
Predicted Functional Partners:
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.918
ATRX
ATRX chromatin remodeler.
   
 
 0.730
LOC111090006
Histone H3; Belongs to the histone H3 family.
    
 0.724
LOC488263
Histone H3; Belongs to the histone H3 family.
    
 0.724
BIRC6
Baculoviral IAP repeat containing 6.
   
 
 0.717
PHIP
Pleckstrin homology domain interacting protein.
  
  
0.708
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
   0.694
URB1
URB1 ribosome biogenesis 1 homolog.
   
  
 0.682
PLCH1
Phosphoinositide phospholipase C.
      
 0.671
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
    0.670
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.