STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT8Synaptotagmin 8. (403 aa)    
Predicted Functional Partners:
SERF2
Small EDRK-rich factor 2.
      
 0.690
SERF2-2
Uncharacterized protein.
      
 0.690
VAMP3
Vesicle associated membrane protein 3.
    
 0.643
NFS1
Aminotran_5 domain-containing protein.
      
 0.627
VAMP8
Vesicle associated membrane protein 8.
   
 0.624
VAMP5
Vesicle associated membrane protein 5.
    
 
 0.601
SYT11
Synaptotagmin 11.
     
0.594
SYT2
Synaptotagmin 2.
  
  
0.590
DAB2
DAB adaptor protein 2.
   
 
 0.575
PICALM
Phosphatidylinositol binding clathrin assembly protein.
    
 0.569
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.