STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
   
 0.992
NOP56
NOP56 ribonucleoprotein.
   
 0.982
UTP18
UTP18 small subunit processome component.
   
 0.982
UTP4
UTP4 small subunit processome component.
   
 0.982
NOL6
Nucleolar protein 6.
   
 
 0.981
WDR43
WD repeat domain 43.
   
0.980
BYSL
Bystin like.
   
 
 0.979
UTP15
UTP15 small subunit processome component.
  
0.979
FBL
Fibrillarin.
   
 0.977
PWP2
Uncharacterized protein.
   
 
 0.977
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.