STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
   
 0.998
NOP56
NOP56 ribonucleoprotein.
   
 0.996
UTP4
UTP4 small subunit processome component.
   
 0.996
BYSL
Bystin like.
   
 
 0.995
UTP15
UTP15 small subunit processome component.
  
0.995
PWP2
Uncharacterized protein.
   
 
0.995
NOL6
Nucleolar protein 6.
   
 0.994
WDR75
WD repeat domain 75.
   
 0.994
UTP18
UTP18 small subunit processome component.
   
 0.994
WDR46
WD repeat-containing protein 46; Scaffold component of the nucleolar structure. Required for localization of DDX21 and NCL to the granular compartment of the nucleolus.
   
 
 0.993
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.