STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMBLCarboxymethylenebutenolidase homolog. (244 aa)    
Predicted Functional Partners:
ADHFE1
Alcohol dehydrogenase iron containing 1.
  
 
 0.839
TRAPPC13
Trafficking protein particle complex 13.
    
   0.718
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.718
TRAPPC8
Trafficking protein particle complex 8.
    
   0.718
JOSD1
Josephin domain containing 1.
      
 0.714
TRAPPC12
Trafficking protein particle complex 12.
    
   0.706
TRAPPC11
Trafficking protein particle complex 11.
    
   0.706
ROPN1L
Rhophilin associated tail protein 1 like.
      
 0.692
TRAPPC2L
Trafficking protein particle complex 2 like.
    
   0.657
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.612
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.