STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C34H5orf49Chromosome 34 C5orf49 homolog. (198 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.955
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.899
C16H4orf47
Chromosome 16 C4orf47 homolog.
   
 
 0.889
IQUB
IQ motif and ubiquitin domain containing.
    
 
 0.881
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.845
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.843
CCDC96
Coiled-coil domain containing 96.
    
 
 0.842
CFAP77
Cilia and flagella associated protein 77.
   
 
 0.840
C1H9orf135
Chromosome 1 C9orf135 homolog.
   
   0.815
CFAP52
Cilia and flagella associated protein 52.
   
   0.808
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.