STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP153Nucleoporin 153. (1478 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
0.997
NUP88
Nucleoporin 88.
   
 0.997
NUP50
Nucleoporin 50.
   
 0.997
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
TPR
Translocated promoter region, nuclear basket protein.
   
 0.993
RANBP2
RAN binding protein 2.
   
0.992
NUP214
Nucleoporin 214.
   
0.991
NUP43
Nucleoporin 43.
   
 0.988
NUP133
Nucleoporin 133.
   
 0.986
NUP188
Nucleoporin 188.
   
 0.985
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.