STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29RAB29, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
 
    
 0.905
LRRK2
Leucine rich repeat kinase 2.
    
 
 0.902
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.824
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
    
 
 0.817
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.808
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.808
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.706
RAB38
RAB38, member RAS oncogene family.
  
 
0.701
RAB35
RAB35, member RAS oncogene family.
     
0.691
SLC41A1
Solute carrier family 41 member 1.
      
 0.677
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.