STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM45BTransmembrane protein 45B. (275 aa)    
Predicted Functional Partners:
TMEM98
Transmembrane protein 98.
      
 0.791
TMEM170B
Transmembrane protein 170B.
      
 0.777
SLC39A6
Uncharacterized protein.
   
  
 0.643
XRRA1
X-ray radiation resistance associated 1.
      
 0.642
TMEM168
Transmembrane protein 168.
      
 0.629
TMEM88
Transmembrane protein 88.
      
 0.626
FRAT2
FRAT regulator of WNT signaling pathway 2.
      
 0.622
SH2D7
Uncharacterized protein.
      
 0.606
GASK1B
Golgi associated kinase 1B.
      
 0.598
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.