STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM45BTransmembrane protein 45B. (275 aa)    
Predicted Functional Partners:
SH2D7
Uncharacterized protein.
      
 0.722
BVES
Blood vessel epicardial substance.
      
 0.643
LRRN4CL
LRRN4 C-terminal like.
      
 0.626
PDCL2
Phosducin like 2.
   
  
 0.607
KRT23
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.573
SLC44A4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
   
  
 0.569
IGSF9B
Immunoglobulin superfamily member 9B.
      
 0.563
TMPRSS11A
Transmembrane protease serine; Belongs to the peptidase S1 family.
      
 0.557
GNG13
G protein subunit gamma 13.
      
 0.539
TLCD4
TLCD4-RWDD3 readthrough.
   
  
 0.537
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.