IFIH1 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IFIH1

Potassium voltage-gated channel subfamily H member 7. (1201 aa)

Predicted Functional Partners:

DISP3

0.720

KCNQ5

0.708

KCNJ3

0.693

ARFGEF3

0.680

KCNQ2

0.642

KCNAB3

0.598

KCNV1

0.594

FBXO2

0.593

CERS6

0.591

LFNG

0.591

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARFGEF3	IFIH1	ENSCAFP00000042958	ENSCAFP00000015451	ARFGEF family member 3.	Potassium voltage-gated channel subfamily H member 7.	0.680
CERS6	DISP3	ENSCAFP00000017392	ENSCAFP00000024408	Ceramide synthase 6.	Dispatched RND transporter family member 3.	0.740
CERS6	FBXO2	ENSCAFP00000017392	ENSCAFP00000063936	Ceramide synthase 6.	F-box protein 2.	0.594
CERS6	IFIH1	ENSCAFP00000017392	ENSCAFP00000015451	Ceramide synthase 6.	Potassium voltage-gated channel subfamily H member 7.	0.591
DISP3	CERS6	ENSCAFP00000024408	ENSCAFP00000017392	Dispatched RND transporter family member 3.	Ceramide synthase 6.	0.740
DISP3	FBXO2	ENSCAFP00000024408	ENSCAFP00000063936	Dispatched RND transporter family member 3.	F-box protein 2.	0.840
DISP3	IFIH1	ENSCAFP00000024408	ENSCAFP00000015451	Dispatched RND transporter family member 3.	Potassium voltage-gated channel subfamily H member 7.	0.720
FBXO2	CERS6	ENSCAFP00000063936	ENSCAFP00000017392	F-box protein 2.	Ceramide synthase 6.	0.594
FBXO2	DISP3	ENSCAFP00000063936	ENSCAFP00000024408	F-box protein 2.	Dispatched RND transporter family member 3.	0.840
FBXO2	IFIH1	ENSCAFP00000063936	ENSCAFP00000015451	F-box protein 2.	Potassium voltage-gated channel subfamily H member 7.	0.593
IFIH1	ARFGEF3	ENSCAFP00000015451	ENSCAFP00000042958	Potassium voltage-gated channel subfamily H member 7.	ARFGEF family member 3.	0.680
IFIH1	CERS6	ENSCAFP00000015451	ENSCAFP00000017392	Potassium voltage-gated channel subfamily H member 7.	Ceramide synthase 6.	0.591
IFIH1	DISP3	ENSCAFP00000015451	ENSCAFP00000024408	Potassium voltage-gated channel subfamily H member 7.	Dispatched RND transporter family member 3.	0.720
IFIH1	FBXO2	ENSCAFP00000015451	ENSCAFP00000063936	Potassium voltage-gated channel subfamily H member 7.	F-box protein 2.	0.593
IFIH1	KCNAB3	ENSCAFP00000015451	ENSCAFP00000024848	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel subfamily A regulatory beta subunit 3.	0.598
IFIH1	KCNJ3	ENSCAFP00000015451	ENSCAFP00000013508	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel subfamily J member 3.	0.693
IFIH1	KCNQ2	ENSCAFP00000015451	ENSCAFP00000045728	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel subfamily Q member 2; Belongs to the potassium channel family.	0.642
IFIH1	KCNQ5	ENSCAFP00000015451	ENSCAFP00000054861	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel subfamily Q member 5.	0.708
IFIH1	KCNV1	ENSCAFP00000015451	ENSCAFP00000001051	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel modifier subfamily V member 1; Belongs to the potassium channel family.	0.594
IFIH1	LFNG	ENSCAFP00000015451	ENSCAFP00000024136	Potassium voltage-gated channel subfamily H member 7.	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.591