STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCGNSecretagogin, EF-hand calcium binding protein. (276 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.821
GRM6
Glutamate metabotropic receptor 6.
   
 
 0.783
VSX1
Visual system homeobox 1.
      
 0.755
DHX57
DExH-box helicase 57.
      
 0.710
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 
 0.688
MARK1
Non-specific serine/threonine protein kinase.
      
 0.681
PRRG2
Proline rich and Gla domain 2.
      
 0.677
LEAP2
Liver enriched antimicrobial peptide 2.
      
 0.672
LRRC20
Leucine rich repeat containing 20.
    
 
 0.651
GPATCH1
G-patch domain containing 1.
      
 0.631
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.