STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC28BCoiled-coil domain containing 28B. (200 aa)    
Predicted Functional Partners:
TXLNA
Taxilin alpha.
 
 
  
 0.726
TMEM234
Transmembrane protein 234.
      
 0.656
IQCC
IQ motif containing C.
 
 
    0.504
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 
 0.484
WDPCP
WD repeat containing planar cell polarity effector.
      
 0.457
CACHD1
Cache domain containing 1.
      
 0.457
MOB3B
MOB kinase activator 3B.
      
 0.449
BBS1
BBS1 domain-containing protein.
    
 
 0.429
BBS4
Ariadne RBR E3 ubiquitin protein ligase 1.
    
 
 0.427
PKIG
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
   
  
 0.407
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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