STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USH2AUsherin. (5198 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
    
 
 0.941
CLRN1
Clarin 1.
   
  
 0.893
WHRN
Whirlin.
    
 
 0.887
CDH23
Cadherin related 23.
     
 0.880
PCDH15
Protocadherin related 15.
   
 
 0.875
USH1G
USH1 protein network component sans.
   
 0.875
LAMB1
Laminin subunit beta 1.
   
 0.861
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.849
CIB2
Calcium and integrin binding family member 2.
    
 0.837
ABCA4
ATP binding cassette subfamily A member 4.
   
  
 0.823
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.