STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain containing 1C. (655 aa)    
Predicted Functional Partners:
GRAMD2B
GRAM domain containing 2B.
    
 
 0.854
GRAMD1B
GRAM domain containing 1B.
    
 
 0.817
PCTP
Phosphatidylcholine transfer protein.
      
 0.770
GOLPH3
Golgi phosphoprotein 3.
      
 0.692
TSPAN11
Tetraspanin.
    
   0.687
CD151
Tetraspanin.
    
   0.687
TMX1
Thioredoxin related transmembrane protein 1.
    
 
 0.632
TRIAP1
TP53 regulated inhibitor of apoptosis 1.
      
 0.611
TRAPPC11
Trafficking protein particle complex 11.
      
 0.597
PITPNM1
Phosphatidylinositol transfer protein membrane associated 1.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.